Synthesis and properties of 6-alkynyl-5-aryluracils

• Ruben Manuel Figueira de Abreu,
• Till Brockmann,
• Alexander Villinger,
• Peter Ehlers and
• Peter Langer

Beilstein J. Org. Chem. 2024, 20, 898–911, doi:10.3762/bjoc.20.80

• functional groups adjacent to them, due to withdrawing effects. Chlorine has a stronger electron-withdrawing effect than bromine, so the electrophilic character of the 6-position should be higher than that of the 5-position. However, it is unlikely to be the only reason for the formation of just one

Access to cyclopropanes with geminal trifluoromethyl and difluoromethylphosphonate groups

• Ita Hajdin,
• Romana Pajkert,
• Mira Keßler,
• Jianlin Han,
• Haibo Mei and
• Gerd-Volker Röschenthaler

Beilstein J. Org. Chem. 2023, 19, 541–549, doi:10.3762/bjoc.19.39

• . Phosphonates containing CF2 groups can sterically and electronically mimic oxygen, enabling the second dissociation constant, pKa2, to closer mirror those of the phosphates due to the electron-withdrawing effect of fluorine [39]. As a result, improved lipophilicity, metabolic stability or bioavailability of

A study of the DIBAL-promoted selective debenzylation of α-cyclodextrin protected with two different benzyl groups

• Naser-Abdul Yousefi,
• Morten L. Zimmermann and
• Mikael Bols

Beilstein J. Org. Chem. 2022, 18, 1553–1559, doi:10.3762/bjoc.18.165

• pattern. The reason for this behavior is probably due to the collective electron-withdrawing effect of the chlorine atoms making the glucose residues of the fully DCB-protected compound more electron deficient at the ring oxygen. This means that the Lewis acidic aluminum reagent has more difficulty

Mechanochemical synthesis of unsymmetrical salens for the preparation of Co–salen complexes and their evaluation as catalysts for the synthesis of α-aryloxy alcohols via asymmetric phenolic kinetic resolution of terminal epoxides

• Shengli Zuo,
• Shuxiang Zheng,
• Jianjun Liu and
• Ang Zuo

Beilstein J. Org. Chem. 2022, 18, 1416–1423, doi:10.3762/bjoc.18.147

• due to the strong electron-withdrawing effect of bromine, enhancing the electrophilic property of bromo-substituted salicylaldehyde. Because of the poor solubility in the eluent, the yield of dichloro-containing 1c (88%) was lower than 1a after isolating by column chromatography. This was also found

Syntheses of novel pyridine-based low-molecular-weight luminogens possessing aggregation-induced emission enhancement (AIEE) properties

• Masayori Hagimori,
• Tatsusada Yoshida,
• Yasuhisa Nishimura,
• Yukiko Ogawa and
• Keitaro Tanaka

Beilstein J. Org. Chem. 2022, 18, 580–587, doi:10.3762/bjoc.18.60

• containing two acceptor (maleimide and pyridine) and one donor (secondary amine) moieties in 72% yield (Scheme 1). Due to the electron-withdrawing effect of the bromo substituent at position 5 of the pyridine ring, the cyclization reaction did not occur. The structure of product 4a was confirmed by 1H and

Efficient N-arylation of 4-chloroquinazolines en route to novel 4-anilinoquinazolines as potential anticancer agents

• Rodolfo H. V. Nishimura,
• Thiago dos Santos,
• Valter E. Murie,
• Luciana C. Furtado,
• Leticia V. Costa-Lotufo and
• Giuliano C. Clososki

Beilstein J. Org. Chem. 2021, 17, 2968–2975, doi:10.3762/bjoc.17.206

• and 9h, respectively) allowed us to isolate the expected derivatives 10m–p in yields ranging from 70 to 84% (Table 1, entries 13–16). The electron-withdrawing effect of the fluoro substituent appeared to affect the reactivity of amine 9g in those reactions drastically, so a longer reaction time (40

Silica gel and microwave-promoted synthesis of dihydropyrrolizines and tetrahydroindolizines from enaminones

• Robin Klintworth,
• Garreth L. Morgans,
• Stefania M. Scalzullo,
• Charles B. de Koning,
• Willem A. L. van Otterlo and
• Joseph P. Michael

Beilstein J. Org. Chem. 2021, 17, 2543–2552, doi:10.3762/bjoc.17.170

• enaminone 15r, which was prepared in situ prior to cyclization. The pyrrolizine 19r was obtained within 90 seconds of microwave heating, and in 99% yield over the two steps. The rapidity of the condensation probably reflects both the inductive electron-withdrawing effect of fluorine and the minimal steric

Synthesis of new substituted 7,12-dihydro-6,12-methanodibenzo[c,f]azocine-5-carboxylic acids containing a tetracyclic tetrahydroisoquinoline core structure

• Agnieszka Grajewska,
• Maria Chrzanowska and
• Wiktoria Adamska

Beilstein J. Org. Chem. 2021, 17, 2511–2519, doi:10.3762/bjoc.17.168

• compound 16; the next step involves the formation of the iminium ion 17, which is then hydrolyzed to compound 8 and hydroxyacetaldehyde in the last step. Thus, the unexpected reactivity of 6a with diluted HCl may be explained by the electron-withdrawing effect exerted by the adjacent COOH group which

Synthesis and investigation on optical and electrochemical properties of 2,4-diaryl-9-chloro-5,6,7,8-tetrahydroacridines

• Najeh Tka,
• Mohamed Adnene Hadj Ayed,
• Mourad Ben Braiek,
• Mahjoub Jabli and
• Peter Langer

Beilstein J. Org. Chem. 2021, 17, 2450–2461, doi:10.3762/bjoc.17.162

• atom and at the two external phenyl groups, show the electron abundance (low electrostatic potential). The trifluoromethoxy group for 4c resulted in a decrease of electron density in the tetrahydroacridine core. In addition, this strong electron-withdrawing effect induced the appearance of blue

Advances in mercury(II)-salt-mediated cyclization reactions of unsaturated bonds

• Sumana Mandal,
• Raju D. Chaudhari and
• Goutam Biswas

Beilstein J. Org. Chem. 2021, 17, 2348–2376, doi:10.3762/bjoc.17.153

• Hg(TFA)2 then five- and six-membered rings 64 and 65 were formed with a 1:4 ratio (Scheme 22) [70]. The greater yield of the six-membered product was primarily due to the electron-withdrawing effect of ethereal oxygen which in turn destabilizes the carbocation at the β-carbon and hence the

Development of N-F fluorinating agents and their fluorinations: Historical perspective

• Teruo Umemoto,
• Yuhao Yang and
• Gerald B. Hammond

Beilstein J. Org. Chem. 2021, 17, 1752–1813, doi:10.3762/bjoc.17.123

• was ≈30 h without the additive (entry 1, Scheme 41), 1 equiv of TfOH shortened this to less than 1 h (entry 2). Therefore, it would appear that this additive acted as a catalyst. With 0.1 equiv of TfOH, the reaction time was 5.5 h (entry 3) which can be attributed to the strong electron-withdrawing

• effect of the 2-SO3H substituent formed by the protonation of the sulfonate anion in 18-2h. 1-19. 1-Fluoro-4-hydroxy-1,4-diazoniabicyclo[2.2.2]octane salts (NFTh) In 1995, Poss and Shia disclosed the synthesis and fluorination reactivity of 1-fluoro-4-hydroxy-1,4-diazoniabicyclo[2.2.2]octane bis

Biochemistry of fluoroprolines: the prospect of making fluorine a bioelement

• Vladimir Kubyshkin,
• Rebecca Davis and
• Nediljko Budisa

Beilstein J. Org. Chem. 2021, 17, 439–460, doi:10.3762/bjoc.17.40

• , while the remaining C–H bond in Flp acquires an enhanced positive charge due to the electron-withdrawing effect of fluorine. Based on these considerations, a fluoroproline–aromatic-system interaction has been previously utilized in the engineering of a few peptide therapeutics [44][45]. 2.3

• biochemical settings [54]. The process becomes slightly faster when proline is replaced by fluorinated analogues. The acceleration occurs due to the electron-withdrawing effect of the fluorine atoms. According to the data for the model compounds in water [16][19], the cis-to-trans rotation velocity increases

• folding kinetic pathways can also lead to aggregation and misfolding issues, affecting the protein production. 2.7 Other properties The acid–base transitions also appear altered in fluoroprolines primarily due to the electron-withdrawing effect of the fluorine atoms (Table 2) [16][19][55][57][58]. This

CF₃-substituted carbocations: underexploited intermediates with great potential in modern synthetic chemistry

• Anthony J. Fernandes,
• Armen Panossian,
• Bastien Michelet,
• Agnès Martin-Mingot,
• Frédéric R. Leroux and
• Sébastien Thibaudeau

Beilstein J. Org. Chem. 2021, 17, 343–378, doi:10.3762/bjoc.17.32

• downfield shifts for the carbon atoms C2 and C6, suggesting a highly delocalized positive charge in the heteroaromatic ring as depicted below. α-(Trifluoromethyl)allylcarbenium ions In 1976, Poulter et al. exploited the powerful electron-withdrawing effect of the CF3 group to elucidate the prenyltransferase

• of dicationic superelectrophile 160. Again, due to charge repulsions as well as due to the strong electron-withdrawing effect of the CF3 group, the positive charge adjacent to the CF3 group is highly delocalized within the phenyl ring, and arylation occurs regioselectively at the para-position

• of this strategy was the installation of a CF3 group in the α-position of the N2 moiety. This strategy relies on the high electron-withdrawing effect of the CF3 group, which greatly destabilizes nearby positive charges. As a result, the dissociation rate for the generation of molecular nitrogen was

Ultrasound-assisted Strecker synthesis of novel 2-(hetero)aryl-2-(arylamino)acetonitrile derivatives

• Emese Gal,
• Luiza Gaina,
• Hermina Petkes,
• Alexandra Pop,
• Castelia Cristea,
• Gabriel Barta,
• Dan Cristian Vodnar and
• Luminiţa Silaghi-Dumitrescu

Beilstein J. Org. Chem. 2020, 16, 2929–2936, doi:10.3762/bjoc.16.242

• 10-methylphenothiazine which was reported to be 143.7° [29], thus revealing a negligible electron-withdrawing effect of the substituent. The aromatic plane situated on the edge of the phenothiazine and the plane of the aromatic unit attached to the amino substituent appear twisted with a dihedral

Synthesis of 1,4-benzothiazinones from acylpyruvic acids or furan-2,3-diones and o-aminothiophenol

• Ekaterina E. Stepanova,
• Maksim V. Dmitriev and
• Andrey N. Maslivets

Beilstein J. Org. Chem. 2020, 16, 2322–2331, doi:10.3762/bjoc.16.193

• intermediate XI intramolecularly attacked at the amide carbonyl group (Scheme 8). Such a change in the intramolecular cyclization direction, possibly, was due to the electron-withdrawing effect of the chloro-substituent in the o-aminothiophenol moiety, which decreased the nucleophilicity of the SH group

Regioselective cobalt(II)-catalyzed [2 + 3] cycloaddition reaction of fluoroalkylated alkynes with 2-formylphenylboronic acids: easy access to 2-fluoroalkylated indenols

• Tatsuya Kumon,
• Miroku Shimada,
• Jianyan Wu,
• Shigeyuki Yamada and
• Tsutomu Konno

Beilstein J. Org. Chem. 2020, 16, 2193–2200, doi:10.3762/bjoc.16.184

• proton Ha of Int-3b is the same as, or higher than the hydroxy group of Int-4b due to the electron-withdrawing effect of the fluoroalkyl group. It should be noted that this process is probably accelerated by 2-propanol or H2O, which is explained by the results that the most 3-fluoroalkylated indenol 4aA

Lipophilicity trends upon fluorination of isopropyl, cyclopropyl and 3-oxetanyl groups

• Benjamin Jeffries,
• Zhong Wang,
• Robert I. Troup,
• Anaïs Goupille,
• Jean-Yves Le Questel,
• Charlene Fallan,
• James S. Scott,
• Elisabetta Chiarparin,
• Jérôme Graton and
• Bruno Linclau

Beilstein J. Org. Chem. 2020, 16, 2141–2150, doi:10.3762/bjoc.16.182

• ]. In this case, the expected lipophilicity reducing effect is offset by the electron-withdrawing effect on the nitrogen (ΔlogP +0.34). The reduction in amine basicity also shifts the distribution of free base and protonated species, resulting in a higher proportion of free base in solution at pH 7.4

• polarizability of the oxygen lone pairs due to the fluorine electronegativity. However, while D2 is a β-fluorohydrin, its fluorine is substituted at a tertiary position, with the C–F bond able to polarize the six C–H bonds of the methyl groups, which has a lipophilicity lowering effect. The electron-withdrawing

• effect of the fluorine is evident from the 1H NMR chemical shift values of the CH3 groups in D1 (0.91 ppm) [29], D3 (0.98 ppm), and D2 (1.37 ppm) [30]. Compared to the monofluorinated D3, difluorination (D4) and trifluorination (D5) at the same carbon atom increases lipophilicity. There is a notable

Azo-dimethylaminopyridine-functionalized Ni(II)-porphyrin as a photoswitchable nucleophilic catalyst

• Jannis Ludwig,
• Julian Helberg,
• Hendrik Zipse and
• Rainer Herges

Beilstein J. Org. Chem. 2020, 16, 2119–2126, doi:10.3762/bjoc.16.179

• 40 mM concentration of 1. So one can expect that the catalytic switching efficiency of 1 should drop at higher concentrations. As expected, DMAP 2 exhibits the highest catalytic activity. The azo-substituted DMAP trans-4 is slightly less effective because of the electron-withdrawing effect of the azo

• group. Surprisingly, however, the catalytic effect drops by a factor of 54 (4 mM pure trans-1 vs trans-4) or by a factor of 18 (40 mM pure trans-1 vs trans-4), if the azopyridine unit of trans-4 is attached to the porphyrin core as realized in trans-1. This is unexpected because any electron-withdrawing

• effect of the electron poor porphyrin should be weak. There are eight bonds between the porphyrin β-position and the pyridine ring including one meta-phenyl connection attenuating the through-bond conjugation. A closer look at the kinetic data in Table 1 (sample I, II, and VII) might give an explanation

Synthesis of 3(2)-phosphonylated thiazolo[3,2-a]oxopyrimidines

• Ksenia I. Kaskevich,
• Anastasia A. Babushkina,
• Vladislav V. Gurzhiy,
• Dmitrij M. Egorov,
• Nataly I. Svintsitskaya and
• Albina V. Dogadina

Beilstein J. Org. Chem. 2020, 16, 1947–1954, doi:10.3762/bjoc.16.161

• -phosphonylated thiazolopyrimidine can be explained by the electron-withdrawing effect of the trifluoromethyl group in the starting 2-thiouracil. In contrast to 6-methyl- or 6-phenyl-2-thiouracil, where the nucleophilicity is localized on the sulfur atom, the presence of the electron-withdrawing CF3 group in 6

Polarity effects in 4-fluoro- and 4-(trifluoromethyl)prolines

• Vladimir Kubyshkin

Beilstein J. Org. Chem. 2020, 16, 1837–1852, doi:10.3762/bjoc.16.151

• order unsubstituted > fluoroproline > (trifluoromethyl)proline reflects the increasing electron-withdrawing effect of the substituents H > –F > –CF3, and it recapitulates the basicity trends observed previously (see Figure 6). Second, the solvation by polar solvents such as water substantially increases

Highly selective Diels–Alder and Heck arylation reactions in a divergent synthesis of isoindolo- and pyrrolo-fused polycyclic indoles from 2-formylpyrrole

• Carlos H. Escalante,
• Eder I. Martínez-Mora,
• Carlos Espinoza-Hicks,
• Alejandro A. Camacho-Dávila,
• Fernando R. Ramos-Morales,
• Francisco Delgado and
• Joaquín Tamariz

Beilstein J. Org. Chem. 2020, 16, 1320–1334, doi:10.3762/bjoc.16.113

• using manganese oxide or DDQ as the oxidizing reagents, or even including Pd/C at high temperatures (250 °C) [45], failed to obtain the series of indoles 23. It is likely that the electron withdrawing effect of the formyl group at the C-7 position counterbalance the delocalization direction of the

Development of fluorinated benzils and bisbenzils as room-temperature phosphorescent molecules

• Shigeyuki Yamada,
• Takuya Higashida,
• Yizhou Wang,
• Masato Morita,
• Takuya Hosokai,
• Kaveendra Maduwantha,
• Kaveenga Rasika Koswattage and
• Tsutomu Konno

Beilstein J. Org. Chem. 2020, 16, 1154–1162, doi:10.3762/bjoc.16.102

• -deficient fluorinated aromatic ring. To confirm the electron-withdrawing effect of this fluorinated aromatic ring, the electronic charge at the adjacent C≡C bond was calculated by density functional theory (DFT) using the Gaussian 16 (Revision B.01) software package [35]. As typical examples, the molecular

Synthesis, liquid crystalline behaviour and structure–property relationships of 1,3-bis(5-substituted-1,3,4-oxadiazol-2-yl)benzenes

• Afef Mabrouki,
• Malek Fouzai,
• Armand Soldera,
• Abdelkader Kriaa and
• Ahmed Hedhli

Beilstein J. Org. Chem. 2020, 16, 149–158, doi:10.3762/bjoc.16.17

• moment magnitudes higher than µ0. In the fluorinated counterparts, the electron-withdrawing effect of perfluoroalkyl groups would produce a reverse effect leading to a dipole lower than µ0. Figure 7 shows an inverse result: the orange plot corresponding to the fluorocarbon derivatives is entirely in the

Facile regiodivergent synthesis of spiro pyrrole-substituted pseudothiohydantoins and thiohydantoins via reaction of [e]-fused 1H-pyrrole-2,3-diones with thiourea

• Aleksandr I. Kobelev,
• Nikita A. Tretyakov,
• Ekaterina E. Stepanova,
• Maksim V. Dmitriev,
• Michael Rubin and
• Andrey N. Maslivets

Beilstein J. Org. Chem. 2019, 15, 2864–2871, doi:10.3762/bjoc.15.280

• capillaries at 130 °C for 12 h did not provoke PTR, and compounds 4 remained unconverted. This phenomenon could be explained by the influence of the electron-withdrawing effect of the acetyl group, which reduced the nucleophilic properties of the acetyl-substituted nitrogen atom in N-acetylthiourea and

Synthesis of dipolar molecular rotors as linkers for metal-organic frameworks

• Sebastian Hamer,
• Fynn Röhricht,
• Marius Jakoby,
• Ian A. Howard,
• Xianghui Zhang,
• Christian Näther and
• Rainer Herges

Beilstein J. Org. Chem. 2019, 15, 1331–1338, doi:10.3762/bjoc.15.132

• groups are known to exhibit the highest electron-withdrawing effect among the uncharged small functional groups [54]. As electron-donating substitutents, amino groups exhibit the strongest effects, especially if tris-alkyl substituted. However, we chose alkoxy substituents for our design, because